What do we need for learning bioinformatics ?

One of big and repeated question about bioinformatics is that: what do we need for learning bioinformatics and how we can learn it, fast, complete and as a useful skill for business or study . Another name for bioinformatics is Bio Data Technology and art of processing laboratory data for achieving fast, new and innovative …

Protein structures: from Amino acid residues to Quaternary Structure

Amino acid residues in proteins: Amino acids are basic structure of proteins in every proteins we know in living organisms and make features and change in protein structures. Each Amino acid consists of a backbone that is present in all the amino acid types and a side chain that is unique to each type of …

How to use Prokka for rapid prokaryotic features annotation

How to use Prokka for rapid prokaryotic features annotationProkka is one of useful software tools package that use for annotating bacterial, archaeal and viral genomes feature data both automatically and manually.This tools use Perl for processing data and it only uses core Perl modules. but has quite a few external tool dependencies, some of which …

How to use UNIX codes for paste with NGS Sequences Data

UNIX shell and command lines are very good tools for using in computational process during bioinformatics and one of useful command line in shell for solving paste problem in NGS data is this command line help us using Paste command as a solution: This command is very useful with simple structure and clearly its potential …

How to Navigating microbial genomes on the NCBI FTP root

NCBI FTP roots, are easy solution for communicating and transferring Large data information between server and clients with fast, secure speed and it will be useful when we want to be sure about decreasing risks and increasing speed.As a bioinformatician, working on microbial genomics, it is good to know NCBI FTP addresses that help you …

Are there any high school bioinformatics projects?

Vaccine, drugs, DNA and protein: biotechnology short course | Season 1 Episode 22 Are there any high school bioinformatics projects? #Bioinformatics science is an amazing experience of using different #algorithms, #computational methods, software, tools and mathematics methodology, statistical solution and #biology science. And today changed our vision through the world reality and absolutely changed face …

Does bioinformatics involve learning computer language? what are they?

Does bioinformatics involve learning computer language? what are they? The direct and short answer to the question that: Does bioinformatics involve learning computer language? Is #YES! Bioinformatics science is an integrated field of science between biotechnology and computational science that try to use #algorithms, #database, large data mining solution, artificial intelligence and machine learning to …

Method for Sorting FASTQ files by sequence length using unix tools

The FASTQ file format which are used for reading and transferring sequences data is used to store short sequence reads, most commonly those from Illumina. The reads are typically between 36 and 250 bp long, and typical data sets contain between 1M to 1B reads. Each entry in a FASTQ file contains three pieces of …

Unix tools commands for Counting Sequences

Unix as a comfortable and useful tools in bioinformatics uses basic commands to do processes in bioinformatics and immunoinformatics. Every command line computational biologists has a suite of specific utility tools classified in their $PATH (root) for doing core operations on common data files, for example counting the number of sequences in a .fasta file. …

Methods & Tools to merge overlapping paired-end Sequences reads

IntroductionOne of important issues faced in bioinformatics is to optimize data for post processes and current sequencing technology begins by breaking up long pieces of DNA into lots more short pieces of DNA. The resultant set of DNA is called a “library” and the short pieces are called “fragments”. Each of the fragments in the …

error: Content is protected !!
Exit mobile version