SDAP is an onine Web based service that integrates a database of allergenic proteins with various computational and bioinformatics tools that can assist structural biology studies related to allergens. SDAP is a useful important tool in the investigation of the cross-reactivity between known allergens from different databases, in testing the FAO/WHO allergenicity rules for new …
Continue reading “Short review to SDAP: Structural Database of Allergenic Proteins”
OPIG is one of useful tools available for analyzing Antibody data and documented in research has expanded its range of tools for antibody/BCR analysis. Here is an updated summary of the OPIG antibody databases and immunoinformatics tools for 2021 NB: Several of our databases/tools [SAbDab, Thera-SAbDab, ABodyBuilder, PEARS, FREAD, Sphinx, ANARCI, Antibody iPatch, EpiPred, SCALOP, …
Today, New integrated scientific fields, change our vision to future and mechanism of life, And immunoinformatics as a new field of science. Big data relevant to immunology researches has been accumulated due to sequencing of genomes of the human and other model organisms for understanding mechanism of life and protecting life from threats.. At the …
In May 2020, Group of students from Oxford university released the Coronavirus Antibody Database (‘CoV-AbDab’) to Manage and capture molecular information on existing coronavirus-binding antibodies, and to track what we anticipated would be a boon of data on antibodies able to bind SARS-CoV-2. At the time, They had found around 300 relevant antibody sequences and …
Continue reading “Coronavirus Antibody Database: Increasingly growth report”
This software Presented by “Bruna Moreira da Silva”, Epitope3D is an epitope prediction tool using graph-based signatures, developed at the “University of Melbourne“, which is an example of a structure-based approach to epitope prediction. It was developed and trained using a curated, non-redundant set of 200 antigen structures with marked epitopes. Individual residues, labeled according …
New immunoinformatics tools On the sequence-side by Dr Anton Feenstra presented that is a new solution called SeRenDIP-CE, a random forest method for predicting epitopes from sequence This method is based on deriving a range of features from the antigen amino-acid sequence (172 features across a sliding window of 9 amino acids, incorporating MSA-derived information) …
Immunoinformatics is a field of Bioinformatics science concentrating on the molecules in the immunology system. Currently, immunoinformatics has paved the way for a better understanding of some infectious disease pathogenesis, diagnosis, immune system response and computational vaccinology
Immunoinformatics as a new integrated field of science concentrate on the finding epitope, antigens and pathogenesis mechanism. An epitope, also known as antigenic determinant, is the part of an antigen that is recognized by the immune system, specifically by antibodies, B cells, or T cells. The epitope is the specific piece of the antigen to …